| GocamStats |
uri |
URI identifier of the entity (contributor or provider). |
| GocamStats |
models |
Count of unique GO-CAM models processed for this entity. |
| GocamStats |
activity_units |
Total number of activities (activity units) in the model(s). |
| GocamStats |
activity_units_enabled_by_gene_product |
Count of activities enabled by a gene product (not a protein complex). |
| GocamStats |
activity_units_enabled_by_protein_complex |
Count of activities enabled by a protein complex. |
| GocamStats |
unique_gene_product_enablers |
Count of unique gene product terms that enable activities. |
| GocamStats |
unique_protein_complex_genes |
Count of unique genes that are members of protein complexes. |
| GocamStats |
unique_gene_product_and_protein_complex_gene_enablers |
Count of the union of gene product enablers and protein complex member genes (deduplicated). |
| GocamStats |
genes |
Total count of all genes (may include duplicates across activities). |
| GocamStats |
unique_references |
Count of unique reference strings across all evidence items. |
| GocamStats |
unique_pmid |
Count of unique PubMed IDs extracted from references. |
| GocamStats |
explicit_causal_relations |
Total count of causal associations on activities (may include duplicates). |
| GocamStats |
unique_explicit_causal_relations |
Count of unique activities that have causal associations. |
| GocamStats |
inputs |
Total count of input molecules (has_input or has_primary_input), may include duplicates. |
| GocamStats |
chemical_inputs |
Count of input molecules that are CHEBI terms. |
| GocamStats |
other_inputs |
Count of input molecules that are not CHEBI terms. |
| GocamStats |
unique_chemical_inputs |
Count of unique CHEBI input molecules. |
| GocamStats |
unique_other_inputs |
Count of unique non-CHEBI input molecules. |
| GocamStats |
outputs |
Total count of output molecules (has_output or has_primary_output), may include duplicates. |
| GocamStats |
chemical_outputs |
Count of output molecules that are CHEBI terms. |
| GocamStats |
other_outputs |
Count of output molecules that are not CHEBI terms. |
| GocamStats |
unique_chemical_outputs |
Count of unique CHEBI output molecules. |
| GocamStats |
unique_other_outputs |
Count of unique non-CHEBI output molecules. |
| GocamStats |
go_terms |
Total count of GO terms across all activities (may include duplicates). |
| GocamStats |
unique_go_terms |
Count of unique GO terms (identified by 'GO:' prefix). |
| GocamStats |
total_inferred_relations |
Total count of inferred relations (activity pairs connected via shared chemical molecules). |
| GocamStats |
list_inferred_relations |
List of inferred relations with lookup keys: activity_a, activity_a_genes, activity_b, activity_b_genes. |
| GocamStats |
unique_models |
List of unique model IDs processed for this entity. |
| GocamStats |
unique_activities |
List of unique activity IDs encountered. |
| GocamStats |
unique_enabled_by_gene_product |
List of unique gene product terms from EnabledByGeneProductAssociation. |
| GocamStats |
list_of_unique_protein_complex_genes |
List of unique genes that are members of protein complexes. |
| GocamStats |
list_enabled_by_gene_product |
List of all gene product enabler terms (may contain duplicates). |
| GocamStats |
list_enabled_by_protein_complex |
List of all protein complex enabler terms (the complex itself, not its member genes; may contain duplicates). |
| GocamStats |
list_of_unique_references |
List of unique reference strings from evidence items. |
| GocamStats |
list_of_unique_explicit_causal_relations |
List of unique activity IDs that have causal associations. |
| GocamStats |
list_explicit_causal_relations |
List of activity IDs with causal associations (may contain duplicates). |
| GocamStats |
unique_activity_unit_gene_product_enablers |
List of unique activity IDs that are enabled by gene products. |
| GocamStats |
unique_activity_unit_protein_complex_enablers |
List of unique activity IDs that are enabled by protein complexes. |
| GocamStats |
unique_protein_complex_in_activity_term |
List of unique protein complex terms (the complex itself, not its member genes). |
| GocamStats |
list_has_input_term |
List of all input molecule terms (covers both has_input and has_primary_input predicates). |
| GocamStats |
list_has_output_term |
List of all output molecule terms (covers both has_output and has_primary_output predicates). |
| GocamStats |
list_go_terms |
List of all GO terms found across the activity tree. |
| ModelDetails |
file_name |
Filename of the JSON source file for this model. |
| ModelDetails |
model_id |
Unique identifier of the GO-CAM model. |
| ModelDetails |
model_name |
Human-readable title/name of the GO-CAM model. |
| ModelDetails |
unique_activities |
List of unique activity IDs in this model. |
| ModelDetails |
model_status |
Status of the GO-CAM model (e.g. 'production', 'development', 'review'). Null if not set. |
| AggregateInfo |
entity |
Label for the aggregation level (e.g. 'Model', 'Curator', 'Group'). |
| AggregateInfo |
total_entities_processed |
Count of unique models, curators, or groups aggregated. |
| AggregateInfo |
models_by_status |
Count of models for each status value (e.g. production, development, unknown). |
| AggregateInfo |
unique_activity_units |
Total count of unique activities across all entities. |
| AggregateInfo |
activity_units_enabled_by_gene_product_association |
Count of activities enabled by gene products across all entities. |
| AggregateInfo |
activity_units_enabled_by_protein_complex_association |
Count of activities enabled by protein complexes across all entities. |
| AggregateInfo |
genes |
Total count of genes summed across all entities. |
| AggregateInfo |
unique_gene_product_enablers |
Count of unique gene product terms across all entities. |
| AggregateInfo |
unique_protein_complex_terms |
Count of unique protein complex terms (the complexes themselves) across all entities. |
| AggregateInfo |
unique_member_protein_complex_genes |
Count of unique genes that are members of protein complexes across all entities. |
| AggregateInfo |
unique_gene_product_and_protein_complex_gene_enablers |
Count of the union of gene product enablers and protein complex member genes (deduplicated) across all entities. |
| AggregateInfo |
explicit_causal_relations |
Sum of explicit causal relations across all entities. |
| AggregateInfo |
unique_references |
Count of unique reference strings across all entities. |
| AggregateInfo |
unique_pmid |
Count of unique PubMed IDs across all entities. |
| AggregateInfo |
inputs |
Total count of input molecules across all entities. |
| AggregateInfo |
chemical_inputs |
Count of CHEBI input molecules across all entities. |
| AggregateInfo |
other_inputs |
Count of non-CHEBI input molecules across all entities. |
| AggregateInfo |
unique_chemical_inputs |
Count of unique CHEBI input molecules across all entities. |
| AggregateInfo |
unique_other_inputs |
Count of unique non-CHEBI input molecules across all entities. |
| AggregateInfo |
outputs |
Total count of output molecules across all entities. |
| AggregateInfo |
chemical_outputs |
Count of CHEBI output molecules across all entities. |
| AggregateInfo |
other_outputs |
Count of non-CHEBI output molecules across all entities. |
| AggregateInfo |
unique_chemical_outputs |
Count of unique CHEBI output molecules across all entities. |
| AggregateInfo |
unique_other_outputs |
Count of unique non-CHEBI output molecules across all entities. |
| AggregateInfo |
go_terms |
Total count of GO terms across all entities. |
| AggregateInfo |
unique_go_terms |
Count of unique GO terms across all entities. |
| AggregateInfo |
total_inferred_relations |
Total count of inferred relations across all entities. |
| AggregateInfo |
list_inferred_relations |
List of inferred relations across all entities. |
| AggregateInfo |
unique_activities |
List of unique activity IDs across entities. |
| AggregateInfo |
unique_enabled_by_gene_product |
List of unique gene product enabler terms across entities. |
| AggregateInfo |
list_of_unique_references |
List of unique reference strings across entities. |
| AggregateInfo |
unique_activity_unit_gene_product_enablers |
List of unique activity IDs enabled by gene products across entities. |
| AggregateInfo |
unique_activity_unit_protein_complex_enablers |
List of unique activity IDs enabled by protein complexes across entities. |
| AggregateInfo |
unique_protein_complex_in_activity_term |
List of unique protein complex terms across all entities. |
| AggregateInfo |
list_of_unique_protein_complex_genes |
List of unique genes that are members of protein complexes across entities. |
| AggregateInfo |
list_model_details |
List of ModelDetails objects (only populated at model aggregate level). |
| AggregateInfo |
list_has_input_term |
List of all input molecule terms (covers both has_input and has_primary_input). |
| AggregateInfo |
list_has_output_term |
List of all output molecule terms (covers both has_output and has_primary_output). |
| AggregateInfo |
list_go_terms |
List of all GO terms across all entities. |
| ProteinComplexActivityInfo |
model_id |
The GO-CAM model ID containing this protein-complex-enabled activity. |
| ProteinComplexActivityInfo |
model_name |
Human-readable title/name of the GO-CAM model (from Model.title). |
| ProteinComplexActivityInfo |
activity_id |
The activity unit ID that is enabled by a protein complex. |
| ProteinComplexActivityInfo |
protein_complex_term |
The protein complex term that carries out the activity. |
| ProteinComplexActivityInfo |
molecular_function |
The molecular function GO term associated with the activity that is carried out by the gene product or complex |
| ProteinComplexActivityInfo |
model_status |
Status of the GO-CAM model (e.g. 'production', 'development', 'review'). Null if not set. |
| ProteinComplexActivityInfo |
unique_curators |
List of unique curator (contributor) URIs from the enabled_by provenances. |
| ProteinComplexActivityInfo |
unique_groups |
List of unique group (provided_by) URIs from the enabled_by provenances. |